BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F03SP1|AL425727
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1115 1394 0.0
>3x_Contig1115
Length = 4702
Score = 1394 bits (700), Expect = 0.0
Identities = 723/734 (98%)
Strand = Plus / Minus
Query: 17 caagatatcatgagattcctttgaattcttttgtagatmttttacgatcttttgctggat 76
|||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 3429 caagatatcatgagattcctttgacttcttttgtagatctttttcgatcttttgctggat 3370
Query: 77 actttttaaagccttwtcarcawaaawctcaacttttttttgtttctctgatgtcgcctt 136
||||||||||||||| ||| || |||||||||||||||||||||||||||||||||
Sbjct: 3369 actttttaaagccttttcagcattcttctcaacttttttttgtttctctgatgtcgcctt 3310
Query: 137 tttggcgttgaaataactggaggcgtttgcaaatgccgataaagataaatcgactgtcag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3309 tttggcgttgaaataactggaggcgtttgcaaatgccgataaagataaatcgactgtcag 3250
Query: 197 cagaacagtttcccgtttctctgatgttatcttggattttcttctactttgctgtttact 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 cagaacagtttcccgtttctctgatgttatcttggattttcttctactttgctgtttact 3190
Query: 257 tttggatgaagttagttcttcaaaatcagaatcagaataatccgatgagacagaggaatc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 tttggatgaagttagttcttcaaaatcagaatcagaataatccgatgagacagaggaatc 3130
Query: 317 tgattggttaacatcactttcgtttgatgaataatcagcttctgactgatgatgttcagt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 tgattggttaacatcactttcgtttgatgaataatcagcttctgactgatgatgttcagt 3070
Query: 377 agaatcatcctcgctgtacccatcttttggtaattcaatggtaattttattatttggtaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 agaatcatcctcgctgtacccatcttttggtaattcaatggtaattttattatttggtaa 3010
Query: 437 atccattggcagcttaatgatccgagcaatcttgttgcctttccgctgctcgtttgctat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 atccattggcagcttaatgatccgagcaatcttgttgcctttccgctgctcgtttgctat 2950
Query: 497 taaagtttccatactttgccagtccatttgttggtccaataagcttttaactgcattctt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 taaagtttccatactttgccagtccatttgttggtccaataagcttttaactgcattctt 2890
Query: 557 ggcctcttctactaaatttgcattagctatcaaaatgtttcctttttcttcgttagtttg 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 ggcctcttctactaaatttgcattagctatcaaaatgtttcctttttcttcgttagtttg 2830
Query: 617 ttgtgcatgtaataacgattttataatagtttcattgttattctttgcctcatccaattt 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 ttgtgcatgtaataacgattttataatagtttcattgttattctttgcctcatccaattt 2770
Query: 677 tttttgagcctggaaatcctgattttggatacggctagcatatttgtttgattctattgt 736
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2769 tttttgagcctggaaatcctgattttggatacagctagcatatttgtttgattctattgt 2710
Query: 737 agaaaagaatgtgt 750
||||||||||||||
Sbjct: 2709 agaaaagaatgtgt 2696
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7709
Number of Sequences: 1807
Number of extensions: 7709
Number of successful extensions: 212
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)